PBOND: Web Server for the Prediction of Proline and Non-Proline cis I trans Isomerization

 
This item is provided by the institution :

Repository :
Repository of UOI Olympias
see the original item page
in the repository's web site and access all digital files if the item*
share



PBOND: Web Server for the Prediction of Proline and Non-Proline cis I trans Isomerization (EN)

Exarchos, Konstantinos P. (EN)

Πανεπιστήμιο Ιωαννίνων. Σχολή Επιστημών και Τεχνολογιών. Τμήμα Βιολογικών Εφαρμογών και Τεχνολογιών (EL)
Exarchos, Konstantinos P. (EN)

PBOND is a web server that predicts the conformation of the peptide bond between any two amino acids. PBOND classifies the peptide bonds into one out of four classes, namely cis imide (cis-Pro), cis amide (cis-nonPro), trans imide (trans-Pro) and trans amide (trans-nonPro). Moreover, for every prediction a reliability index is computed. The underlying structure of the server consists of three stages: (1) feature extraction, (2) feature selection and (3) peptide bond classification. PBOND can handle both single sequences as well as multiple sequences for batch processing. The predictions can either be directly downloaded from the web site or returned via e-mail. The PBOND web server is freely available at http://195.251.198.21/pbond.html. (EN)

peptide bond (EN)


Genomics, Proteomics & Bioinformatics (EN)

2009




*Institutions are responsible for keeping their URLs functional (digital file, item page in repository site)