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Mathematical modeling of cancer cell invasion of tissue: Biological insight from mathematical analysis and computational simulation

Creator: Andasari, V, Gerisch, A, South, AP, Chaplain, MAJ, Lolas, G

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2011

Language: English

Journal: Journal of Mathematical Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Combined logical and data-driven models for linking signalling pathways to cellular response

Creator: Melas, IN, Weiss, TS, Alexopoulos, LG, Mitsos, A, Messinis, DE

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2011

Language: English

Journal: BMC Systems Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

The logic of EGFR/ErbB signaling: Theoretical properties and analysis of high-throughput data

Creator: Samaga, R, Sorger, PK, Saez-Rodriguez, J, Alexopoulos, LG, Klamt, S

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2009

Language: English

Journal: PLoS Computational Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

An advanced discrete state-discrete event multiscale simulation model of the response of a solid tumor to chemotherapy: Mimicking a clinical study

Creator: Georgiadi, E, Stamatakos, GS, Desmedt, C, Kolokotroni, EA, Dionysiou, DD

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2010

Language: English

Journal: Journal of Theoretical Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Identifying drug effects via pathway alterations using an integer linear programming optimization formulation on phosphoproteomic data

Creator: Melas, IN, Chairakaki, AD, Siminelakis, P, Saez-Rodriguez, J, Alexopoulos, LG, Mitsos, A

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2009

Language: English

Journal: PLoS Computational Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

A four-dimensional simulation model of tumour response to radiotherapy in vivo: Parametric validation considering radiosensitivity, genetic profile and fractionation

Creator: Stamatakos, GS, Uzunoglu, NK, Nikita, KS, Marioli, A, Dionysiou, DD

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology

Υear: 2004

Language: English

Journal: Journal of Theoretical Biology

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Ανάπτυξη ενός συνόλου εργαλείων εξόρυξης ενωποιημένων δεδομένων για την διερεύνηση ινωματικών δεδομένων Development of an integrated data mining toolkit for the investigation of fibromics data

Creator: Fanidis, Dionysios, Φανίδης, Διονύσιος

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology

Υear: 2024

Language: English

School/department/institute: Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών ▶ Σχολή Επιστημών Υγείας ▶ Τμήμα Ιατρικής ▶ Κλινικοεργαστηριακός Τομέας ▶ Εργαστήριο & Κλινική Παθολογικής Φυσιολογίας

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Βελτίωση του εργαλείου UniReD για την πρόβλεψη πρωτεϊνικών αλληλεπιδράσεων και χρήση του για τη μελέτη της σχέσης των ασθενειών της κατάθλιψης και καρωτιδικής νόσου Further development of UniReD tool for the prediction of protein protein interactions to assess carotid artery disease and major depressive disorder comorbidity

Creator: Μπαλτσαβιά, Ισμήνη, Baltsavia, Ismini

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology

Υear: 2024

Language: English

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Εφαρμογές της θεωρίας κυκλωμάτων και της θεωρίας των γράφων για τη μελέτη της οικολογικής συνδεσιμότητας σε δυναμικά μεταβαλλόμενα τοπία Applications of circuit theory and graph theory on ecological connectivity in dynamically changing landscapes

Creator: Πέτσας, Παναγιώτης, Petsas, Panagiotis

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology

Υear: 2023

Language: English

School/department/institute: Aristotle University of Thessaloniki ▶ Faculty of Sciences ▶ School of Biology ▶ Department of Ecology

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Μελέτη της επίδρασης χημικών παραγόντων στη γονιδιακή έκφραση με μικροσυστοιχίες: ανάπτυξη νέας υπολογιστικής μεθόδου σε καρκινικές σειρές The effects of chemical agents on the global cellular gene expression profile as revealed by microarrays analysis: development of a new computational method in cancer cell lines

Creator: Katsiki, Anna, Κατσίκη, Άννα

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Biochemistry and Molecular Biology

Υear: 2024

Language: Greek

School/department/institute: National and Kapodistrian University of Athens ▶ School of Science ▶ Department of Biology ▶ Section of Biochemistry & Molecular Biology

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Μικροβιακές κοινότητες υπό το πρίσμα της αλληλουχίας υψηλής απόδοσης, της ολοκλήρωσης δεδομένων και της ανάλυσης μεταβολικών δικτύων Microbial communities through the lens of high throughput sequencing, data integration and metabolic networks analysis

Creator: Ζαφειρόπουλος, Χαράλαμπος, Zafeiropoulos, Charalampos

Item type: PhD thesis

Scientific field: Microbiology, Mathematical and Computational Biology

Υear: 2022

Language: English

School/department/institute: Univerisity of Crete ▶ School of Sciences & Engineering ▶ Department of Biology (1981 - ...)

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Eπίδραση υψηλών θερμοκρασιών στο μεταβολισμό εκτρεφόμενων ειδών ψαριών: συνδυάζοντας πειραματική προσέγγιση και μαθηματική μοντελοποίηση Effects of high temperatures on the metabolism of farmed fish: combining experimental approach and mathematical modeling

Creator: Σταυρακίδης-Ζάχου, Ορέστης, Stavrakidis-Zachou, Orestis

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Marine and Freshwater Biology

Υear: 2022

Language: Greek

School/department/institute: Univerisity of Crete ▶ School of Sciences & Engineering ▶ Department of Biology (1981 - ...)

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

A FORMULA FOR THE GINI COEFFICIENT AND ITS DECOMPOSITION

Creator: TZIAFETAS, GN

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Statistics and Probability

Υear: 1989

Language: English

Journal: BIOMETRICAL JOURNAL

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

A multifactorial analysis of obesity as CVD risk factor: Use of neural network based methods in a nutrigenetics context

Creator: Valavanis, IK, Nikita, KS, Mougiakakou, SG, Grimaldi, KA

Item type: Scientific article, Publication in journal

Scientific field: Biotechnology, Microbiology, Mathematical and Computational Biology

Υear: 2010

Language: English

Journal: BMC Bioinformatics

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Accurate microRNA target prediction correlates with protein repression levels

Creator: Dalamagas, T, Simossis, VA, Koziris, N, Tsanakas, P, Goumas, G, Maragkakis, M, Sethupathy, P, Sellis, T, Alexiou, P, Hatzigeorgiou, AG, Kourtis, K, Koukis, E, Reczko, M, Giannopoulos, G, Vergoulis, T, Papadopoulos, GL

Item type: Scientific article, Publication in journal

Scientific field: Biotechnology, Microbiology, Mathematical and Computational Biology

Υear: 2009

Language: English

Journal: BMC Bioinformatics

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Integrating multiple immunogenetic data sources for feature extraction and mining somatic hypermutation patterns: the case of “towards analysis” in chronic lymphocytic leukaemia

Creator: Tsoumakas, Grigorios, Stamatopoulos, Κ., Magklaveras, Nikolaos, Ηadzidimitriou, Α., Chouvarda, Ioanna, Xochelli, A., Vlachavas, Ioannis, Agathangelidis, A., Kavakiotis, Ioannis

Item type: Scientific article, Publication in journal

Scientific field: Medical and Health Sciences, Mathematical and Computational Biology, Computer and Information Sciences

Υear: 2016

Language: English

School/department/institute: Aristotle University of Thessaloniki ▶ Faculty of Sciences ▶ School of Informatics (1991 - ...), Aristotle University of Thessaloniki ▶ Faculty of Health Sciences ▶ School of Medicine

Institution: Aristotle University of Thessaloniki

Collection : Aristotle University of Thessaloniki - ΙΚΕΕ

On the expected probability of correct classification

Creator: Kokolakis, GE

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Statistics and Probability

Υear: 1981

Language: English

Journal: Biometrika

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Ανάπτυξη υπολογιστικών μεθόδων ανάλυσης της απόκρισης του κυττάρου στο γενοτοξικό στρες Development of computational methods for the study of cellular responses to genotoxic stress

Creator: Κωνσταντόπουλος, Δημήτριος, Konstantopoulos, Dimitrios

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Bioinformatics

Υear: 2020

Language: English

School/department/institute: Univerisity of Crete ▶ School of Sciences & Engineering ▶ Department of Biology (1981 - ...)

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Επιρροή των σύγχρονων μεθόδων πρόβλεψης πρωτεϊνικών δομών στον προσδιορισμό ομολογίας, εξελικτικών σχέσεων και βιολογικής λειτουργίας Impact of recent protein structure prediction methods on homology, evolutionary and functional inference

Creator: Baltzis, Athanasios, Μπαλτζής, Αθανάσιος

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Bioinformatics

Υear: 2023

Language: English

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Δυναμική στοιβάδας ενυδάτωσης και μηχανισμών συσσωμάτωσης διατροφικών και αντιπηκτικών πρωτεϊνών: μελέτη μοριακής δυναμικής και δειγματοληψίας μεταβατικών τροχιών Hydration layer dynamics and association mechanisms of food and antifreeze proteins: a molecular dynamics and transition path sampling study

Creator: Μπροτζάκης, Ζαχαρίας-Φαίδων, Brotzakis, Zacharias-Faidon

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Physical and Theoretical Chemistry

Υear: 2017

Language: English

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Μελέτη της επίδρασης της δενδριτικής μορφολογίας και των διαύλων ιόντων στην νευρωνική μοντελοποίηση Study of the effect of dendritic morphology and ion channels on neuronal modeling

Creator: Bozelos, Panagiotis, Μποζέλος, Παναγιώτης

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Biochemistry and Molecular Biology, Genetics and Heredity

Υear: 2024

Language: English

School/department/institute: Democritus University of Thrace ▶ Faculty of Health Sciences ▶ Department of Molecular Biology and Genetics (2000 - ...)

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Mοντελοποίηση και προσομοίωση των μηχανισμών αναδίπλωσης πρωτεϊνών και πρωτεόστασης Modeling and simulation of protein folding and proteostasis mechanisms

Creator: Avramouli, Antigoni, Αβραμούλη, Αντιγόνη

Item type: PhD thesis

Scientific field: Mathematical and Computational Biology, Bioinformatics

Υear: 2022

Language: English

School/department/institute: Ionian University ▶ Faculty of Information Science & Informatics ▶ Department of Informatics ▶ Bioinformatics and Human Electrophysiology Laboratory

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Classification of Error-Related Negativity (ERN) and Positivity (Pe) potentials using kNN and Support Vector Machines

Creator: Karanasiou, I, Asvestas, P, Ventouras, EM, Matsopoulos, GK

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2011

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Downgrading BIRADS 3 to BIRADS 2 category using a computer-aided microcalcification analysis and risk assessment system for early breast cancer

Creator: Spyrou, GM, Antaraki, A, Andreadis, I, Giannakopoulou, G, Nonni, A, Ligomenides, PA, Filippakis, GM, Nikita, KS, Zografos, GC, Koulocheri, D, Zagouri, F

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2010

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Simulating chemotherapeutic schemes in the individualized treatment context: The paradigm of glioblastoma multiforme treated by temozolomide in vivo

Creator: Stamatakos, GS, Uzunoglu, NK, Antipas, VP

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2006

Language: English

Journal: COMPUTERS IN BIOLOGY AND MEDICINE

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Application of Kohonen network for automatic point correspondence in 2D medical images

Creator: Asvestas, PA, Markaki, VE, Matsopoulos, GK

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2009

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Assessment of the classification capability of prediction and approximation methods for HRV analysis

Creator: Manis, G, Nikolopoulos, S, Davos, C, Alexandridi, A

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2007

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

A computer simulation of in vivo tumour growth and response to radiotherapy: New algorithms and parametric results

Creator: Stamatakos, GS, Uzunoglu, NK, Nikita, KS, Dionysiou, DD

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2006

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Telematics enabled virtual simulation system for radiation treatment planning

Creator: Zacharaki, EI, Gletsos, M, Ntasis, E, Vasios, CE, Nikita, KS, Maniatis, TA, Mouravliansky, NA, Golemati, S

Item type: Scientific article, Publication in journal

Scientific field: Mathematical and Computational Biology, Medical Engineering, Computer and Information Sciences

Υear: 2005

Language: English

Journal: Computers in Biology and Medicine

Institution: National Technical University of Athens

Collection : Digital Library of National Technical University of Athens | Dspace@NTUA

Κατανοώντας τα μεταβολικά χαρακτηριστικά των αιματολογικών καρκίνων μεσώ προσέγγισης πολλαπλών-Ομικών τεχνολογιών Understanding the metabolic signatures of haematological cancers through an integrative multi-Omics approach

Creator: Papatzikas, Grigorios, Παπατζήκας, Γρηγόριος

Item type: PhD thesis

Scientific field: Hematology, Mathematical and Computational Biology

Υear: 2020

Language: English

Institution: National Documentation Centre (EKT)

Collection : National Archive of PhD Theses | ΕΚΤ NA.Ph.D.

Mathematical and Computational Biology

Discover 71 items with this subject category

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Mathematical modeling of cancer cell invasion of tissue: Biological insight from mathematical analysis and computational simulation

Combined logical and data-driven models for linking signalling pathways to cellular response

The logic of EGFR/ErbB signaling: Theoretical properties and analysis of high-throughput data

An advanced discrete state-discrete event multiscale simulation model of the response of a solid tumor to chemotherapy: Mimicking a clinical study

Identifying drug effects via pathway alterations using an integer linear programming optimization formulation on phosphoproteomic data

A four-dimensional simulation model of tumour response to radiotherapy in vivo: Parametric validation considering radiosensitivity, genetic profile and fractionation

Ανάπτυξη ενός συνόλου εργαλείων εξόρυξης ενωποιημένων δεδομένων για την διερεύνηση ινωματικών δεδομένων Development of an integrated data mining toolkit for the investigation of fibromics data

A FORMULA FOR THE GINI COEFFICIENT AND ITS DECOMPOSITION

A multifactorial analysis of obesity as CVD risk factor: Use of neural network based methods in a nutrigenetics context

Accurate microRNA target prediction correlates with protein repression levels

Integrating multiple immunogenetic data sources for feature extraction and mining somatic hypermutation patterns: the case of “towards analysis” in chronic lymphocytic leukaemia

On the expected probability of correct classification

Ανάπτυξη υπολογιστικών μεθόδων ανάλυσης της απόκρισης του κυττάρου στο γενοτοξικό στρες Development of computational methods for the study of cellular responses to genotoxic stress

Μελέτη της επίδρασης της δενδριτικής μορφολογίας και των διαύλων ιόντων στην νευρωνική μοντελοποίηση Study of the effect of dendritic morphology and ion channels on neuronal modeling

Mοντελοποίηση και προσομοίωση των μηχανισμών αναδίπλωσης πρωτεϊνών και πρωτεόστασης Modeling and simulation of protein folding and proteostasis mechanisms

Classification of Error-Related Negativity (ERN) and Positivity (Pe) potentials using kNN and Support Vector Machines

Downgrading BIRADS 3 to BIRADS 2 category using a computer-aided microcalcification analysis and risk assessment system for early breast cancer

Simulating chemotherapeutic schemes in the individualized treatment context: The paradigm of glioblastoma multiforme treated by temozolomide in vivo

Application of Kohonen network for automatic point correspondence in 2D medical images

Assessment of the classification capability of prediction and approximation methods for HRV analysis

A computer simulation of in vivo tumour growth and response to radiotherapy: New algorithms and parametric results

Telematics enabled virtual simulation system for radiation treatment planning

Mathematical and Computational Biology

Discover 71 items with this subject category

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